MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus xylosus
19428wA1_WT6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 75
bases: 2,822,460 bps
CDS: 2,614
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,684
Total number of protein coding genes annotated/found:
2,614
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5046|JADGLO010000006.1
SEQF5046_02297
Genome Viewer
NA
AA
1191/397
363-1553
Bicarbonate transporter BicA
SEQF5046|JADGLO010000006.1
SEQF5046_02298
Genome Viewer
NA
AA
1131/377
1553-2683
N-acetylcysteine deacetylase
SEQF5046|JADGLO010000006.1
SEQF5046_02299
Genome Viewer
NA
AA
882/294
2762-3643
putative oxidoreductase YghA
SEQF5046|JADGLO010000006.1
SEQF5046_02300
Genome Viewer
NA
AA
612/204
3771-4382
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02301
Genome Viewer
NA
AA
1293/431
4747-6039
Malate-2H(+)/Na(+)-lactate antiporter
SEQF5046|JADGLO010000006.1
SEQF5046_02302
Genome Viewer
NA
AA
507/169
6472-6978
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02303
Genome Viewer
NA
AA
762/254
8027-7266
HTH-type transcriptional regulator GlvR
SEQF5046|JADGLO010000006.1
SEQF5046_02304
Genome Viewer
NA
AA
1596/532
8250-9845
PTS system maltose-specific EIICB component
SEQF5046|JADGLO010000006.1
SEQF5046_02305
Genome Viewer
NA
AA
531/177
10556-10026
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02306
Genome Viewer
NA
AA
915/305
10821-11735
Pantothenate precursors transporter PanS
SEQF5046|JADGLO010000006.1
SEQF5046_02307
Genome Viewer
NA
AA
645/215
11961-12605
Phosphorylated carbohydrates phosphatase
SEQF5046|JADGLO010000006.1
SEQF5046_02308
Genome Viewer
NA
AA
192/64
12610-12801
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02309
Genome Viewer
NA
AA
183/61
13032-12850
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02310
Genome Viewer
NA
AA
360/120
13388-13029
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02311
Genome Viewer
NA
AA
831/277
14289-13459
putative formate transporter 1
SEQF5046|JADGLO010000006.1
SEQF5046_02312
Genome Viewer
NA
AA
1392/464
14590-15981
putative transport protein YifK
SEQF5046|JADGLO010000006.1
SEQF5046_02313
Genome Viewer
NA
AA
1428/476
16384-17811
Alkaline phosphatase 3
SEQF5046|JADGLO010000006.1
SEQF5046_02314
Genome Viewer
NA
AA
876/292
18918-18043
putative HTH-type transcriptional regulator YbbH
SEQF5046|JADGLO010000006.1
SEQF5046_02315
Genome Viewer
NA
AA
1440/480
20360-18921
PTS system EIIBC component
SEQF5046|JADGLO010000006.1
SEQF5046_02316
Genome Viewer
NA
AA
888/296
21320-20433
N-acetylmuramic acid 6-phosphate etherase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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